| 1 | Jens Allmer | v1 writing | The 00010 transcript set (`experimental/fasta/00010.fasta`) holds ten de novo-assembled transcripts from a plant transcriptome assembly. This article reports their lengths; the table and the figure below come from one run of the workflow `fasta-lengths-report`, and each caption links to the record of that run. |
| 2 | Jens Allmer | v1 writing | |
| 3 | Jens Allmer | v1 writing | ## Lengths |
| 4 | Jens Allmer | v1 writing | |
| 5 | Example Editor (fixture) | v2 editing | The transcripts are between 610 and 1,570 nucleotides long, with a median of 912.5 and a mean of 961.8 nucleotides. |
| 6 | Jens Allmer | v1 writing | |
| 7 | Jens Allmer | v1 writing | ```embed |
| 8 | Jens Allmer | v1 writing | { "embed": "lengths-table", "view": {} } |
| 9 | Jens Allmer | v1 writing | ``` |
| 10 | Jens Allmer | v1 writing | |
| 11 | Jens Allmer | v1 writing | ## Distribution |
| 12 | Jens Allmer | v1 writing | |
| 13 | Jens Allmer | v1 writing | Most transcripts fall between 600 and 1,200 nucleotides; a single transcript (pdi2004denovo) is longer than 1,400. |
| 14 | Jens Allmer | v1 writing | |
| 15 | Jens Allmer | v1 writing | {{embed lengths-histogram view=width:560}} |
| 16 | Jens Allmer | v1 writing | |
| 17 | Jens Allmer | v1 writing | ## Reproducing |
| 18 | Jens Allmer | v1 writing | |
| 19 | Jens Allmer | v1 writing | Every embed names the workflow document, the dataset and the endpoint. Re-running the workflow on the same data gives the same content hash, which is how a reader verifies a figure. |